I've had different paint issues. My hood got scratched in shipping, and the dealership re-painted it. I have a couple bubbles in the paint now, one of which is the direct result of a really big bird crap. When my replacement parts come in (passenger scoop and headlight assemblies), they're going to do my hood again.
Moral of the story: protect your car after they paint it! If you live in a humid climate, a day of drying might not be enough. My paint was apparently still soft the day after I picked it up, hence the big bird crap induced bubble.